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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
77
candidate regulatory elements
45
target gene predictions
40
chromatin state
8
accessible chromatin
6
binding sites
5
histone modifications
3
eQTL
3
gene expression
1
variant allelic effects
Date released
110
September, 2022
50
February, 2021
8
June, 2020
6
May, 2021
4
February, 2024
3
August, 2017
3
January, 2022
3
March, 2024
March, 2020
1
October, 2022
Available data
145
bed bed3+
37
bed bed9
3
tsv
Organism
188
Homo sapiens
Biosample type
153
tissue
34
cell line
1
primary cell
Organ
816
epithelium
646
kidney
428
brain
401
connective tissue
355
musculature of body
301
lung
268
intestine
250
pancreas
248
vasculature
235
limb
230
heart
218
bodily fluid
212
embryo
207
blood
194
skin of body
189
blood vessel
167
large intestine
143
extraembryonic component
141
liver
109
stomach
105
eye
88
bone element
81
adipose tissue
81
mammary gland
81
uterus
79
small intestine
78
prostate gland
71
placenta
69
artery
64
penis
64
ureter
62
adrenal gland
62
lymph node
47
gonad
47
thymus
40
esophagus
40
spinal cord
33
spleen
26
testis
24
lymphoid tissue
22
nerve
22
vein
21
thyroid gland
20
ovary
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
vagina
9
urinary bladder
trachea
4
nose
1
pericardium
Project
188
AMP
ENCODE
Genome assembly (visualization)
182
hg19
42
GRCh38
award.project!
ENCODE
month_released!
March, 2020
organ_slims!
trachea
BIOSAMPLE
TYPE
188 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
variant allelic effects
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
6
5
1
thyroid gland
8
5
4
1
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
+ See 9 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
thyroid follicular cell
1
See all biosamples
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