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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
143
candidate regulatory elements
91
target gene predictions
75
chromatin state
65
accessible chromatin
51
gene expression
43
binding sites
35
histone modifications
23
eQTL
17
variant allelic effects
14
differential activity
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
201
September, 2022
167
February, 2021
28
June, 2020
19
February, 2024
19
May, 2021
17
September, 2023
12
October, 2022
11
August, 2021
10
January, 2020
10
March, 2020
10
May, 2020
9
February, 2020
8
January, 2022
7
August, 2017
7
March, 2023
7
November, 2022
3
April, 2020
3
May, 2022
3
November, 2020
2
January, 2021
2
March, 2024
2
May, 2024
2
October, 2019
2
September, 2018
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
1
November, 2019
Available data
406
bed bed3+
68
bed bed9
67
tsv
24
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
567
Homo sapiens
Biosample type
268
primary cell
146
tissue
96
cell line
56
in vitro differentiated cells
1
stem cell
Organ
822
epithelium
649
kidney
466
brain
410
connective tissue
364
musculature of body
302
lung
270
intestine
260
vasculature
259
pancreas
245
heart
244
limb
218
bodily fluid
213
embryo
207
blood
201
blood vessel
194
skin of body
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
88
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
75
artery
71
placenta
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
541
AMP
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
490
hg19
102
GRCh38
2
hg18
award.project!
ENCODE
BIOSAMPLE
TYPE
567 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
pQTL
primary cell
foreskin keratinocyte
11
4
4
osteoblast
2
2
1
5
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
fibroblast of dermis
4
4
3
1
+ See 46 more…
tissue
spleen
15
8
6
2
1
1
1
adipose tissue
7
8
6
2
3
1
4
1
subcutaneous adipose tissue
2
1
2
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
prostate gland
4
2
2
1
2
2
1
+ See 10 more…
cell line
22Rv1
4
2
2
1
1
GM23248
2
1
1
1
1
1
LNCaP clone FGC
3
2
2
PC-3
2
1
1
1
1
1
RWPE1
2
1
1
1
1
1
+ See 20 more…
in vitro differentiated cells
adipocyte
4
6
6
4
1
1
1
mesenchymal stem cell
3
3
2
1
1
1
chondrocyte
5
foreskin keratinocyte
1
1
1
foreskin melanocyte
1
1
1
+ See 10 more…
stem cell
mesenchymal stem cell
1
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