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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
134
target gene predictions
113
candidate regulatory elements
59
chromatin state
10
accessible chromatin
8
histone modifications
6
binding sites
3
eQTL
3
gene expression
3
variant allelic effects
Date released
164
September, 2022
71
February, 2021
69
July, 2026
10
June, 2020
6
February, 2024
6
May, 2021
4
August, 2017
3
January, 2022
3
March, 2024
2
March, 2020
1
October, 2022
Available data
281
bed bed3+
55
bed bed9
3
tsv
Organism
339
Homo sapiens
Collection Tags
165
EpiMap
69
ENCODE-rE2G
59
ENCODE
23
ChIP-Atlas
11
DGA
3
GTEx
3
T1D
3
T2D
3
eQTLCatalogue
2
4DN
Biosample type
277
tissue
58
cell line
4
primary cell
Organ
3365
blood
2896
vasculature
2858
blood vessel
2853
bodily fluid
2659
vein
903
brain
825
epithelium
753
kidney
478
heart
468
connective tissue
431
lung
375
musculature of body
339
intestine
301
pancreas
286
skin of body
244
limb
235
liver
220
large intestine
213
embryo
171
extraembryonic component
157
eye
142
adipose tissue
131
stomach
111
muscle organ
103
bone element
98
mammary gland
95
placenta
93
small intestine
92
adrenal gland
92
thymus
91
uterus
88
artery
87
prostate gland
73
ureter
64
penis
63
spleen
62
gonad
62
lymph node
60
__MARKER__
49
spinal cord
45
thyroid gland
44
esophagus
31
testis
30
ovary
25
nerve
24
lymphoid tissue
22
skeleton
21
mouth
18
lymphatic vessel
15
breast
14
bronchus
13
pituitary gland
13
urinary bladder
12
bone marrow
12
tongue
12
vagina
5
trachea
4
nose
1
embryonic structure
1
gallbladder
1
pericardium
Project
339
AMP
ENCODE
Genome assembly (visualization)
264
hg19
129
GRCh38
award.project!
ENCODE
BIOSAMPLE
TYPE
339 results
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Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
histone modifications
binding sites
eQTL
gene expression
variant allelic effects
tissue
small intestine
30
29
15
1
1
large intestine
28
27
13
1
1
sigmoid colon
10
10
5
1
transverse colon
9
8
4
1
1
Peyer's patch
7
7
3
1
+ See 17 more…
cell line
HCT116
19
2
1
HT-29
3
2
1
1
1
1
SW480
2
2
1
1
1
1
RKO
1
1
1
1
1
Caco-2
3
1
+ See 4 more…
primary cell
enterocyte
3
intestinal epithelial cell
1
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