Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 202gene expression
  • 159candidate regulatory elements
  • 77chromatin state
  • 75target gene predictions
  • 56differential activity
  • 47accessible chromatin
  • 16variant allelic effects
  • 7binding sites
  • 6histone modifications
  • 4eQTL
Date released
  • 225September, 2022
  • 188February, 2021
  • 140September, 2023
  • 28August, 2021
  • 19May, 2020
  • 15June, 2020
  • 14January, 2020
  • 9February, 2020
  • 3March, 2020
  • 2March, 2024
  • 2October, 2022
  • 1April, 2019
  • 1February, 2024
  • 1January, 2022
  • 1May, 2019
Available data
  • 308bed bed3+
  • 251tsv
  • 87txt
  • 77bed bed9
  • 33bigWig
  • 2bigBed bed9
Organism
  • 649Homo sapiens
Collection Tags
  • 225EpiMap
  • 146DGA
  • 140KPMP
  • 91ENCODE
  • 26ChIP-Atlas
  • 2GTEx
  • 1T1D
  • 1T2D
  • 1eQTLCatalogue
Biosample type
  • 306primary cell
  • 301tissue
  • 41cell line
  • 1in vitro differentiated cells
Organ
  • 2907vasculature
  • 2859bodily fluid
  • 2848blood
  • 2845blood vessel
  • 2658vein
  • 831epithelium
  • 649kidney
  • 467brain
  • 430connective tissue
  • 369musculature of body
  • 302lung
  • 270intestine
  • 259pancreas
  • 247heart
  • 244limb
  • 213embryo
  • 194skin of body
  • 168large intestine
  • 158liver
  • 143extraembryonic component
  • 110stomach
  • 105eye
  • 99adipose tissue
  • 88bone element
  • 81mammary gland
  • 81uterus
  • 80small intestine
  • 79artery
  • 78prostate gland
  • 71placenta
  • 64penis
  • 64ureter
  • 63adrenal gland
  • 62lymph node
  • 48gonad
  • 48thymus
  • 43spinal cord
  • 41esophagus
  • 34spleen
  • 26testis
  • 25nerve
  • 24lymphoid tissue
  • 21lymphatic vessel
  • 21ovary
  • 21thyroid gland
  • 19mouth
  • 18skeleton
  • 14bronchus
  • 13breast
  • 13pituitary gland
  • 12bone marrow
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 509AMP
  • 140KPMP
  • ENCODE
Genome assembly (visualization)
  • 384hg19
  • 102GRCh38
award.project!
  • ENCODE
BIOSAMPLE
TYPE

649 results

search-icontable-tab-icon
Clear Filters
gene expression
candidate regulatory elements
chromatin state
target gene predictions
differential activity
accessible chromatin
variant allelic effects
binding sites
histone modifications
eQTL
primary cell
epithelial cell of proximal tubule16211111
glomerular endothelial cell1421121
glomerular visceral epithelial cell52112
kidney tubule cell13222
kidney glomerular epithelial cell121121
tissue
kidney7291614101121
right kidney20101011
renal cortex interstitium209911
renal pelvis199921
left kidney1899
cell line
HEK293311121
ACHN2111
Caki22111
RCC 78602111
G401211
in vitro differentiated cells
renal cell carcinoma1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego