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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
91
candidate regulatory elements
54
target gene predictions
49
chromatin state
11
accessible chromatin
11
binding sites
6
histone modifications
4
eQTL
4
gene expression
3
Fine-mapped variants
1
variant allelic effects
Date released
128
September, 2022
62
February, 2021
10
June, 2020
7
May, 2021
5
March, 2020
4
August, 2017
3
February, 2024
3
January, 2020
3
January, 2022
3
March, 2024
3
October, 2022
2
May, 2020
1
February, 2020
Available data
177
bed bed3+
45
bed bed9
8
tsv
2
bigBed bed9
1
bigWig
Organism
234
Homo sapiens
Biosample type
171
tissue
39
cell line
24
primary cell
Organ
832
epithelium
649
kidney
466
brain
418
connective tissue
364
musculature of body
302
lung
270
intestine
263
vasculature
259
pancreas
247
heart
244
limb
218
bodily fluid
213
embryo
207
blood
201
blood vessel
194
skin of body
168
large intestine
153
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
88
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
75
artery
71
placenta
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
lymphatic vessel
21
ovary
21
thyroid gland
19
mouth
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
234
AMP
ENCODE
Genome assembly (visualization)
226
hg19
55
GRCh38
award.project!
ENCODE
BIOSAMPLE
TYPE
234 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
Fine-mapped variants
variant allelic effects
tissue
large intestine
27
14
13
1
1
spinal cord
14
8
7
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
+ See 10 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 5 more…
primary cell
endothelial cell of umbilical vein
6
4
5
2
2
1
astrocyte of the spinal cord
2
1
1
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