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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
27
candidate regulatory elements
22
target gene predictions
20
gene expression
19
chromatin state
16
accessible chromatin
14
histone modifications
9
eQTL
7
binding sites
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
1
differential activity
Date released
52
September, 2022
28
February, 2021
15
February, 2024
10
August, 2021
10
March, 2020
5
June, 2020
3
August, 2017
3
January, 2020
3
May, 2020
3
May, 2021
2
February, 2020
2
January, 2022
2
May, 2022
1
July, 2020
1
March, 2024
1
November, 2019
1
October, 2022
1
September, 2018
Available data
92
bed bed3+
21
tsv
16
bed bed9
15
bigWig
3
csv
1
bam
1
bigBed bed9
Organism
143
Homo sapiens
Biosample type
68
tissue
40
primary cell
28
cell line
7
in vitro differentiated cells
Organ
822
epithelium
649
kidney
466
brain
410
connective tissue
364
musculature of body
302
lung
270
intestine
vasculature
259
pancreas
245
heart
244
limb
218
bodily fluid
213
embryo
207
blood
201
blood vessel
194
skin of body
168
large intestine
151
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
88
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
75
artery
71
placenta
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
lymphatic vessel
18
skeleton
14
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
pericardium
Project
143
AMP
ENCODE
Genome assembly (visualization)
117
hg19
44
GRCh38
2
hg18
award.project!
ENCODE
organ_slims!
pericardium
vasculature
BIOSAMPLE
TYPE
143 results
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Clear Filters
candidate regulatory elements
target gene predictions
gene expression
chromatin state
accessible chromatin
histone modifications
eQTL
binding sites
variant allelic effects
Fine-mapped variants
caQTL
differential activity
tissue
liver
13
10
1
9
4
2
7
1
1
1
vagina
4
2
1
2
1
right lobe of liver
2
1
1
1
1
3
primary cell
hepatocyte
1
2
13
1
7
4
1
2
hepatic stellate cell
1
1
1
1
2
1
1
Liver fetal (hepatocyte)
1
cell line
HepG2
2
3
2
2
5
3
HuH-7
1
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
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