Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 49target gene predictions
  • 35candidate regulatory elements
  • 34accessible chromatin
  • 33differential activity
  • 24gene expression
  • 17chromatin state
  • 14histone modifications
  • 13binding sites
  • 8eQTL
  • 4variant allelic effects
  • 3Fine-mapped variants
  • 1caQTL
Date released
  • 46September, 2022
  • 43July, 2026
  • 30May, 2026
  • 28February, 2024
  • 26February, 2021
  • 12May, 2024
  • 10August, 2021
  • 10March, 2020
  • 5June, 2020
  • 4March, 2023
  • 3August, 2017
  • 3January, 2020
  • 3May, 2020
  • 3May, 2021
  • 2February, 2020
  • 2May, 2022
  • 1January, 2022
  • 1July, 2020
  • 1November, 2019
  • 1October, 2022
  • 1September, 2018
Available data
  • 156bed bed3+
  • 27tsv
  • 19bigWig
  • 14bed bed9
  • 3csv
  • 1bam
  • 1bigBed bed9
Organism
  • 235Homo sapiens
Collection Tags
  • 47DGA
  • 42EpiMap
  • 30pyxis
  • 29AMP
  • 28HDMA
  • 17ChIP-Atlas
  • 15ENCODE-rE2G
  • 14 T2DKP
  • 13T2DKP
  • 12FNIH_projects-liver
  • 11ENCODE
  • 5GTEx
  • 4HPAP
  • 1T1D
  • 1T2D
  • 1eQTLCatalogue
Biosample type
  • 130primary cell
  • 65tissue
  • 32cell line
  • 8in vitro differentiated cells
Organ
  • 3365blood
  • 2896vasculature
  • 2858blood vessel
  • 2853bodily fluid
  • 2659vein
  • 903brain
  • 825epithelium
  • 753kidney
  • 478heart
  • 468connective tissue
  • 431lung
  • 375musculature of body
  • 339intestine
  • 301pancreas
  • 286skin of body
  • 244limb
  • 235liver
  • 220large intestine
  • 213embryo
  • 171extraembryonic component
  • 157eye
  • 142adipose tissue
  • 131stomach
  • 111muscle organ
  • 105bone element
  • 98mammary gland
  • 95placenta
  • 93small intestine
  • 92adrenal gland
  • 92thymus
  • 91uterus
  • 88artery
  • 87prostate gland
  • 73ureter
  • 64penis
  • 63spleen
  • 62gonad
  • 62lymph node
  • 60__MARKER__
  • 49spinal cord
  • 45thyroid gland
  • 44esophagus
  • 31testis
  • 30ovary
  • 25nerve
  • 24lymphoid tissue
  • 24skeleton
  • 21mouth
  • 18lymphatic vessel
  • 15breast
  • 14bronchus
  • 13pituitary gland
  • 13urinary bladder
  • 12bone marrow
  • 12tongue
  • 12vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 235AMP
  • ENCODE
Genome assembly (visualization)
  • 131hg19
  • 110GRCh38
  • 2hg18
award.project!
  • ENCODE
BIOSAMPLE
TYPE

235 results

search-icontable-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
differential activity
gene expression
chromatin state
histone modifications
binding sites
eQTL
variant allelic effects
Fine-mapped variants
caQTL
primary cell
hepatocyte72114131412
hepatic stellate cell32341111
endothelial cell of hepatic sinusoid446
endothelial cell1114
cholangiocyte114
tissue
liver12134192171
right lobe of liver621113
left lobe of liver1
cell line
HepG2522253
HuH-7211111
HuH-7.5211
hepatic stellate cell11
in vitro differentiated cells
hepatocyte221
hepatocyte(AFP)3
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego