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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
43
total RNA-seq
16
ATAC-seq
4
ChIP-seq
2
RRBS
2
small RNA-seq
Assay category
45
Transcription
16
DNA accessibility
4
DNA binding
2
DNA methylation
Target of assay
2
histone
2
histone modification
2
narrow histone mark
1
control
1
transcription factor
Date released
169
August, 2017
157
July, 2018
72
September, 2018
61
May, 2021
55
November, 2019
53
October, 2018
39
April, 2018
26
February, 2021
24
May, 2022
19
February, 2023
16
October, 2019
14
March, 2020
10
November, 2020
9
September, 2017
8
January, 2021
6
July, 2019
5
March, 2019
5
November, 2018
5
October, 2017
4
August, 2021
3
August, 2018
2
May, 2019
1
August, 2022
1
February, 2020
1
June, 2018
Available data
48
bam
47
bigWig
44
tsv
3
bed narrowPeak
3
tagAlign
2
bed bedMethyl
2
bigBed bedMethyl
Organism
67
Homo sapiens
Biosample type
43
tissue
21
cell line
3
in vitro differentiated cells
Organ
67
pancreas
37
epithelium
28
heart
19
connective tissue
15
brain
12
adipose tissue
11
kidney
10
musculature of body
10
vasculature
9
blood vessel
9
liver
5
limb
3
artery
2
embryo
2
pericardium
1
bone element
1
bone marrow
1
eye
1
thymus
Project
66
AMP
1
T1D
Genome assembly (visualization)
49
hg19
47
GRCh38
Lab
66
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
21
inconsistent ontology term
award.project!
HPAP
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
67 results
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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
RRBS
small RNA-seq
tissue
islet of Langerhans
36
1
body of pancreas
2
2
pancreas
1
1
cell line
EndoC_BH1
4
16
1
in vitro differentiated cells
pancreatic PP cell
3
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