Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
77
ChIP-seq
23
ATAC-seq
6
DNase-seq
6
total RNA-seq
1
pCHi-C
1
single cell RNA-seq
Assay category
77
DNA binding
29
DNA accessibility
7
Transcription
Target of assay
56
transcription factor
18
control
12
RNA binding protein
1
chromatin remodeller
Date released
29
December, 2018
24
May, 2022
20
October, 2018
14
November, 2018
10
November, 2017
6
January, 2019
4
December, 2017
3
October, 2017
2
August, 2017
1
August, 2018
1
July, 2018
Available data
114
fastq
113
bam
88
bed narrowPeak
71
bigWig
67
bigBed narrowPeak
6
bed bed3+
6
bed broadPeak
6
bigBed broadPeak
6
txt
1
bedpe bed3+
1
tsv
Organism
114
Homo sapiens
Biosample type
66
tissue
46
cell line
1
in vitro differentiated cells
1
primary cell
Organ
39
pancreas
35
blood
35
bodily fluid
18
liver
13
adipose tissue
13
connective tissue
9
spleen
1
epithelium
Project
114
AMP
HPAP
Genome assembly (visualization)
89
hg19
71
GRCh38
Lab
90
AMP-T2D consortium
24
Kyle Gaulton, UCSD
award.project!
HPAP
BIOSAMPLE
ASSAY
114 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
total RNA-seq
pCHi-C
single cell RNA-seq
tissue
islet of Langerhans
18
6
body of pancreas
11
1
2
spleen
7
1
1
omental fat pad
6
1
1
right lobe of liver
4
1
1
+ See 2 more…
cell line
GM12878
35
HepG2
11
in vitro differentiated cells
white fat cell
1
primary cell
pancreatic alpha cell
1
See all biosamples
Download