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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ATAC-seq
6
total RNA-seq
4
single cell RNA-seq
1
snATAC-seq
Assay category
19
DNA accessibility
10
Transcription
Date released
667
February, 2021
399
May, 2021
357
August, 2017
307
October, 2019
284
August, 2021
216
June, 2019
July, 2018
147
May, 2020
129
February, 2023
120
May, 2019
98
July, 2019
91
November, 2017
80
April, 2019
76
October, 2018
73
September, 2018
61
March, 2020
61
November, 2019
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
November, 2018
34
December, 2018
31
December, 2017
26
May, 2022
25
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
8
January, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
3
June, 2018
1
August, 2022
1
October, 2022
Available data
27
bam
27
fastq
18
bed narrowPeak
7
txt
3
bigWig
3
tsv
1
bed bed3+
Organism
29
Homo sapiens
Biosample type
26
tissue
3
primary cell
Organ
liver
25
pancreas
2
musculature of body
1
epithelium
Project
HPAP
29
AMP
Genome assembly (visualization)
22
hg19
3
GRCh38
Lab
24
Kyle Gaulton, UCSD
5
AMP-T2D consortium
Audit category:
1
audit script error
1
inconsistent ontology term
award.project!
HPAP
month_released!
July, 2018
organ_slims!
liver
BIOSAMPLE
ASSAY
29 results
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Clear Filters
ATAC-seq
total RNA-seq
single cell RNA-seq
snATAC-seq
tissue
islet of Langerhans
18
6
skeletal muscle tissue
1
1
primary cell
pancreatic cell
1
pancreatic ductal cell
1
unclassified exocrine cell
1
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