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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
421
ChIP-seq
3
ATAC-seq
Assay category
421
DNA binding
3
DNA accessibility
Target of assay
244
transcription factor
100
histone
100
histone modification
74
control
66
recombinant protein
60
broad histone mark
40
narrow histone mark
37
RNA binding protein
15
chromatin remodeller
2
other context
2
other post-translational modification
Date released
644
February, 2021
406
November, 2017
341
May, 2020
338
May, 2021
315
August, 2021
296
October, 2019
223
August, 2017
214
June, 2019
118
May, 2019
110
February, 2023
102
July, 2019
94
December, 2017
81
November, 2018
April, 2019
50
March, 2020
47
September, 2023
42
May, 2022
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
24
February, 2020
23
October, 2018
19
April, 2020
18
October, 2017
15
May, 2023
11
July, 2018
10
April, 2018
10
December, 2019
8
January, 2018
8
January, 2021
6
November, 2019
6
November, 2020
5
March, 2023
2
June, 2018
1
August, 2018
1
October, 2022
1
September, 2018
Available data
403
bam
343
bigWig
336
fastq
321
bed narrowPeak
318
bigBed narrowPeak
92
tagAlign
73
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
424
Homo sapiens
Biosample type
315
cell line
100
tissue
9
primary cell
Organ
315
liver
107
brain
6
epithelium
6
vasculature
pancreas
3
blood vessel
1
adipose tissue
1
connective tissue
1
spleen
Project
424
AMP
Genome assembly (visualization)
289
GRCh38
289
hg19
Lab
424
AMP-T2D consortium
Audit category:
14
missing controlled_by
Audit category:
21
inconsistent control read length
4
inconsistent control run_type
award.project!
HPAP
month_released!
April, 2019
organ_slims!
pancreas
BIOSAMPLE
ASSAY
424 results
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Clear Filters
ChIP-seq
ATAC-seq
cell line
HepG2
315
tissue
layer of hippocampus
22
brain
15
caudate nucleus
15
substantia nigra
15
cingulate gyrus
14
+ See 4 more…
primary cell
astrocyte of the cerebellum
3
brain microvascular endothelial cell
3
choroid plexus epithelial cell
3
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