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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
344
ChIP-seq
Assay category
344
DNA binding
Target of assay
344
transcription factor
control
109
histone modification
108
histone
82
recombinant protein
62
narrow histone mark
58
RNA binding protein
46
broad histone mark
23
chromatin remodeller
5
other context
5
other post-translational modification
Date released
241
November, 2017
52
November, 2018
33
December, 2017
11
August, 2021
4
August, 2017
3
December, 2018
Available data
339
bigWig
335
bed narrowPeak
333
fastq
332
bam
320
bigBed narrowPeak
44
bed broadPeak
44
bigBed broadPeak
3
tar
2
bed bed3+
Organism
344
Homo sapiens
Biosample type
297
cell line
45
tissue
2
in vitro differentiated cells
Organ
338
liver
51
blood
51
bodily fluid
40
connective tissue
19
pancreas
17
adipose tissue
17
heart
10
kidney
9
epithelium
9
vasculature
8
blood vessel
6
spleen
5
artery
3
brain
3
embryo
1
eye
Project
344
AMP
Genome assembly (visualization)
335
hg19
292
GRCh38
Lab
333
AMP-T2D consortium
11
Bing Ren, UCSD
Audit category:
27
inconsistent control
Audit category:
12
missing controlled_by
Audit category:
15
inconsistent control read length
8
inconsistent control run_type
award.project!
HPAP
target.investigated_as!
control
BIOSAMPLE
ASSAY
344 results
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Clear Filters
ChIP-seq
cell line
HepG2
297
tissue
liver
37
spleen
6
right lobe of liver
2
in vitro differentiated cells
hepatocyte
2
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