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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
971
histone modifications
888
accessible chromatin
878
candidate regulatory elements
816
binding sites
672
gene expression
479
target gene predictions
168
eQTL
167
differential activity
140
variant allelic effects
111
chromatin state
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
2
Fine-mapped variants
1
pQTL
1
representative DNase hypersensitivity sites
Date released
2590
February, 2021
September, 2022
389
May, 2021
378
February, 2024
333
November, 2021
289
June, 2020
286
September, 2023
155
May, 2020
March, 2020
123
August, 2021
106
January, 2022
101
October, 2022
89
January, 2020
70
March, 2023
64
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
41
May, 2024
35
August, 2017
32
February, 2023
30
March, 2024
14
November, 2019
14
October, 2019
9
August, 2018
9
May, 2019
8
April, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
4219
bed bed3+
821
tsv
523
bigWig
108
txt
40
bigBed bed9
36
bed bed9
34
bed bed9+
24
csv
15
bigBed narrowPeak
1
bam
Organism
5279
Homo sapiens
Biosample type
1999
primary cell
1803
cell line
1166
tissue
355
in vitro differentiated cells
2
stem cell
Organ
795
epithelium
424
kidney
332
connective tissue
248
brain
224
pancreas
179
vasculature
162
musculature of body
143
bodily fluid
138
blood
134
heart
133
embryo
130
blood vessel
123
intestine
102
liver
102
skin of body
97
limb
97
lung
82
eye
75
large intestine
71
uterus
57
adipose tissue
49
stomach
48
artery
47
bone element
47
extraembryonic component
45
mammary gland
39
prostate gland
38
lymph node
34
penis
30
adrenal gland
26
small intestine
25
gonad
25
placenta
25
ureter
23
esophagus
17
lymphatic vessel
16
spinal cord
16
vein
15
spleen
15
thymus
14
testis
13
nerve
13
pituitary gland
11
thyroid gland
10
bone marrow
10
ovary
9
bronchus
9
lymphoid tissue
9
skeleton
7
breast
7
mouth
5
trachea
4
tongue
4
vagina
3
urinary bladder
1
nose
1
pericardium
Project
4642
AMP
333
ENCODE
281
KPMP
60
T1D
LungMap
11
community
ITG
Genome assembly (visualization)
4351
hg19
999
GRCh38
4
hg18
award.project!
ITG
LungMap
month_released!
March, 2020
September, 2022
BIOSAMPLE
TYPE
5327 results
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table-tab-icon
Clear Filters
histone modifications
accessible chromatin
candidate regulatory elements
binding sites
gene expression
target gene predictions
eQTL
differential activity
variant allelic effects
chromatin state
caQTL
hQTL
sQTL
variant to gene
meQTL
other
Fine-mapped variants
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
86
18
1
15
2
4
2
1
1
CD8-positive, alpha-beta T cell
30
4
7
3
5
1
endothelial cell
1
15
3
2
9
7
1
2
2
fibroblast
16
3
1
4
2
6
macrophage
11
3
2
3
7
3
1
+ See 438 more…
cell line
HeLa-S3
2
1
52
H1-hESC
1
1
2
8
38
K562
1
1
1
2
17
1
EndoC_BH1
1
8
1
8
3
1
breast cancer cell
11
9
+ See 743 more…
tissue
islet of Langerhans
1
5
1
9
1
13
1
3
2
2
2
kidney
2
10
15
1
7
1
1
2
heart
1
5
18
1
3
2
2
retina
1
23
3
1
1
1
1
stomach
1
3
21
1
2
1
+ See 254 more…
in vitro differentiated cells
neural progenitor cell
15
10
1
7
adipocyte
1
4
2
1
1
4
4
embryonic stem cell
1
6
1
5
hematopoietic multipotent progenitor cell
1
1
9
1
1
cardiomyocytes
11
+ See 118 more…
stem cell
H1-hESC
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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