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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
49
single cell RNA-seq
16
total RNA-seq
10
snATAC-seq
3
ATAC-seq
Assay category
65
Transcription
13
DNA accessibility
Date released
265
August, 2021
189
February, 2023
176
May, 2022
139
February, 2021
115
August, 2017
75
May, 2021
60
October, 2019
59
September, 2020
58
May, 2020
47
September, 2023
42
March, 2020
40
May, 2024
26
July, 2019
25
February, 2020
19
April, 2020
16
January, 2021
15
May, 2023
14
November, 2017
10
November, 2020
8
October, 2017
7
August, 2020
4
January, 2018
4
July, 2018
4
March, 2019
4
March, 2023
4
October, 2022
3
December, 2019
2
November, 2019
1
April, 2019
1
August, 2022
1
December, 2018
1
November, 2018
1
September, 2018
Available data
41
fastq
19
zippedFastqFolder
3
bigWig
Organism
77
Homo sapiens
Biosample type
59
primary cell
19
tissue
Organ
19
epithelium
19
lung
19
pancreas
Project
59
HPAP
19
LungMap
Genome assembly (visualization)
3
GRCh38
Lab
59
Klaus Kaestner, Upenn
19
Xin Sun, UCSD
award.project!
ITG
biosample_type!
in vitro differentiated cells
files.file_type!
bam
BIOSAMPLE
ASSAY
78 results
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single cell RNA-seq
total RNA-seq
snATAC-seq
ATAC-seq
primary cell
Langerhans cell
40
pancreatic alpha cell
15
2
pancreatic beta cell
1
1
tissue
lung
9
10
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