Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
189
target gene predictions
175
candidate regulatory elements
124
accessible chromatin
102
chromatin state
78
gene expression
49
binding sites
33
histone modifications
27
eQTL
27
variant allelic effects
26
differential activity
15
Fine-mapped variants
4
caQTL
Date released
255
September, 2022
180
February, 2021
86
February, 2024
64
November, 2021
37
September, 2023
28
June, 2020
23
May, 2021
22
March, 2020
21
January, 2020
21
May, 2020
14
February, 2020
14
October, 2022
11
January, 2022
11
March, 2023
9
August, 2017
8
August, 2021
7
November, 2022
5
April, 2020
5
March, 2024
4
February, 2023
4
October, 2019
3
May, 2022
3
November, 2019
3
November, 2020
2
January, 2021
2
May, 2024
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
May, 2019
Available data
610
bed bed3+
116
tsv
93
bed bed9
84
bigWig
10
bigBed bed9
7
txt
1
bigBed narrowPeak
Organism
849
Homo sapiens
Biosample type
400
primary cell
296
tissue
102
cell line
50
in vitro differentiated cells
1
stem cell
Organ
949
epithelium
652
kidney
466
brain
456
connective tissue
375
musculature of body
311
lung
289
intestine
277
pancreas
266
vasculature
255
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
156
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
741
AMP
64
ENCODE
35
KPMP
5
LungMap
ITG
2
T1D
2
community
Genome assembly (visualization)
726
hg19
284
GRCh38
2
hg18
award.project!
ITG
BIOSAMPLE
TYPE
849 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
primary cell
fibroblast
4
16
1
2
6
pericyte cell
10
1
10
1
endothelial cell of umbilical vein
4
6
2
5
2
1
osteoblast
2
2
5
1
2
3
2
endothelial cell of hepatic sinusoid
6
4
6
+ See 69 more…
tissue
stomach
21
40
3
19
1
1
1
adipose tissue
8
7
2
6
3
1
4
1
coronary artery
3
3
3
3
1
2
2
3
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
tibial artery
2
3
3
3
1
2
2
3
+ See 25 more…
cell line
HeLa-S3
55
5
3
1
GM23248
1
2
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
1
2
1
smooth muscle cell of the coronary artery
1
1
1
1
+ See 11 more…
in vitro differentiated cells
adipocyte
6
4
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
See all biosamples
Download