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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
36
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
2
gene expression
Date released
98
September, 2022
46
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
137
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
172
Homo sapiens
Biosample type
132
tissue
34
cell line
6
primary cell
Organ
937
epithelium
632
kidney
449
connective tissue
429
brain
369
musculature of body
307
lung
286
intestine
267
pancreas
248
vasculature
243
heart
232
limb
218
bodily fluid
215
embryo
207
blood
201
skin of body
188
blood vessel
172
large intestine
154
liver
145
extraembryonic component
118
stomach
107
eye
88
bone element
87
mammary gland
83
adipose tissue
83
small intestine
82
uterus
77
prostate gland
72
adrenal gland
72
placenta
67
artery
64
penis
62
lymph node
61
ureter
48
thymus
47
gonad
42
esophagus
42
spinal cord
33
spleen
24
lymphoid tissue
24
testis
23
lymphatic vessel
22
ovary
22
thyroid gland
21
nerve
21
vein
18
mouth
18
skeleton
15
bronchus
12
bone marrow
12
breast
12
pituitary gland
10
tongue
10
urinary bladder
9
vagina
5
trachea
4
nose
1
pericardium
Project
166
AMP
6
ENCODE
Genome assembly (visualization)
170
hg19
41
GRCh38
award.project!
LungMap
month_released!
January, 2022
May, 2020
BIOSAMPLE
TYPE
172 results
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candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 6 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
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