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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
23
ATAC-seq
16
WGBS
10
total RNA-seq
2
single cell RNA-seq
1
Hi-C
Assay category
23
DNA accessibility
16
DNA methylation
12
Transcription
1
3D chromatin structure
Date released
29
May, 2022
14
September, 2018
2
August, 2020
2
September, 2017
1
April, 2018
1
August, 2017
1
July, 2018
1
October, 2022
1
September, 2020
Available data
29
zippedFastqFolder
22
bigWig
22
fastq
19
bam
12
tsv
7
bed narrowPeak
7
bigBed narrowPeak
1
bedpe bed3+
1
cool
1
hic
Organism
52
Homo sapiens
Biosample type
52
primary cell
Organ
52
epithelium
52
pancreas
Project
33
HPAP
19
AMP
Genome assembly (visualization)
22
GRCh38
20
hg19
Lab
33
Klaus Kaestner, Upenn
19
AMP-T2D consortium
Audit category:
1
audit script error
award.project!
LungMap
files.run_type!
single-ended
BIOSAMPLE
ASSAY
52 results
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ATAC-seq
WGBS
total RNA-seq
single cell RNA-seq
Hi-C
primary cell
pancreatic beta cell
23
16
10
2
1
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