Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
460
accessible chromatin
369
target gene predictions
360
candidate regulatory elements
210
histone modifications
100
binding sites
76
variant allelic effects
11
caQTL
6
chromatin state
5
eQTL
3
hQTL
2
meQTL
1
other
Date released
332
February, 2021
330
November, 2021
323
September, 2022
179
May, 2021
103
February, 2024
81
May, 2020
56
January, 2021
52
June, 2020
36
May, 2024
31
October, 2022
21
January, 2020
16
August, 2021
13
May, 2022
9
November, 2022
6
August, 2017
5
October, 2019
4
February, 2023
2
January, 2022
2
November, 2020
1
June, 2021
1
March, 2020
Available data
1603
bed bed3+
586
tsv
389
bigWig
162
bed bed9
108
txt
27
bed bed9+
16
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1558
Homo sapiens
Biosample type
2123
cell line
1850
tissue
1603
primary cell
345
in vitro differentiated cells
4
stem cell
Organ
448
epithelium
213
connective tissue
104
vasculature
83
skin of body
70
pancreas
69
blood vessel
52
kidney
41
musculature of body
40
liver
39
mammary gland
35
penis
32
extraembryonic component
31
brain
27
lung
26
heart
23
intestine
20
artery
20
eye
18
embryo
15
vein
13
bronchus
12
bone element
lymphatic vessel
11
adrenal gland
11
bone marrow
11
stomach
9
blood
9
bodily fluid
9
esophagus
9
placenta
8
prostate gland
6
large intestine
5
trachea
5
uterus
4
small intestine
3
gonad
3
mouth
3
spinal cord
3
thyroid gland
2
ovary
1
limb
1
thymus
Project
1214
AMP
330
ENCODE
59
T1D
LungMap
Genome assembly (visualization)
1597
hg19
532
GRCh38
award.project!
LungMap
organ_slims!
lymphatic vessel
BIOSAMPLE
TYPE
1603 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
target gene predictions
candidate regulatory elements
histone modifications
binding sites
variant allelic effects
caQTL
chromatin state
eQTL
hQTL
meQTL
other
primary cell
monocyte
18
2
86
1
1
1
CD8-positive, alpha-beta T cell
4
5
7
30
common myeloid progenitor, CD34-positive
14
27
endothelial cell
15
7
3
1
2
2
2
1
B cell
5
10
17
+ See 324 more…
See all biosamples
Download