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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
ChIP-seq
Assay category
20
DNA binding
Target of assay
616
histone modification
615
histone
361
narrow histone mark
341
control
253
broad histone mark
108
transcription factor
20
RNA binding protein
8
recombinant protein
5
nucleotide modification
2
chromatin remodeller
Date released
6
August, 2017
5
May, 2021
5
May, 2024
2
November, 2017
1
April, 2019
1
August, 2021
November, 2019
Available data
105
bigWig
104
bed narrowPeak
102
bam
bigBed narrowPeak
89
fastq
9
bed broadPeak
9
bigBed broadPeak
2
bed bed3+
1
tar
Organism
20
Homo sapiens
Biosample type
9
in vitro differentiated cells
8
tissue
3
cell line
Organ
5
heart
4
connective tissue
3
liver
2
pancreas
1
kidney
Project
20
AMP
Genome assembly (visualization)
11
GRCh38
7
hg19
Lab
9
AMP-T2D consortium
5
Kyle Gaulton, UCSD
5
Patrick T. Ellinor, Broad
1
Bing Ren, UCSD
Audit category:
1
missing controlled_by
award.project!
LungMap
files.file_type!
bigBed narrowPeak
month_released!
November, 2019
BIOSAMPLE
ASSAY
20 results
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Clear Filters
ChIP-seq
in vitro differentiated cells
embryonic stem cell
5
adipocyte
4
tissue
left cardiac atrium
5
islet of Langerhans
2
kidney
1
cell line
HepG2
3
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