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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
37
ChIP-seq
5
DNase-seq
3
ATAC-seq
2
WGBS
Assay category
54
Transcription
37
DNA binding
8
DNA accessibility
2
DNA methylation
Target of assay
26
histone
26
histone modification
18
broad histone mark
11
transcription factor
8
narrow histone mark
3
other context
3
other post-translational modification
1
RNA binding protein
Date released
56
February, 2021
21
October, 2019
6
January, 2019
6
November, 2018
3
December, 2018
3
July, 2019
3
May, 2019
2
June, 2019
1
October, 2017
Available data
126
bam
101
bigWig
88
bed narrowPeak
59
tsv
38
bigBed narrowPeak
24
fastq
6
tagAlign
5
bed bed3+
5
bed broadPeak
5
bigBed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
Organism
101
Homo sapiens
Biosample type
56
cell line
43
tissue
2
primary cell
Organ
623
pancreas
608
liver
570
connective tissue
425
adipose tissue
301
epithelium
224
heart
222
brain
155
vasculature
150
blood vessel
131
kidney
91
limb
85
artery
68
musculature of body
58
bone element
55
blood
55
bodily fluid
31
nerve
29
embryo
18
ureter
16
spleen
15
vein
6
eye
1
pericardium
1
pituitary gland
Project
101
AMP
Genome assembly (visualization)
101
GRCh38
99
hg19
Lab
101
AMP-T2D consortium
award.project!
LungMap
lab.title!
Bing Ren, UCSD
BIOSAMPLE
ASSAY
101 results
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Clear Filters
total RNA-seq
ChIP-seq
DNase-seq
ATAC-seq
WGBS
cell line
smooth muscle cell of the coronary artery
52
4
tissue
tibial artery
18
2
1
spleen
12
1
1
2
coronary artery
3
2
1
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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