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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
150
candidate regulatory elements
116
target gene predictions
113
accessible chromatin
87
chromatin state
75
gene expression
53
binding sites
37
histone modifications
28
eQTL
26
differential activity
26
variant allelic effects
15
Fine-mapped variants
4
caQTL
2
pQTL
Date released
213
September, 2022
170
February, 2021
53
November, 2021
37
September, 2023
34
February, 2024
28
June, 2020
21
January, 2020
21
March, 2020
21
May, 2020
21
May, 2021
14
February, 2020
13
October, 2022
12
August, 2021
11
March, 2023
10
January, 2022
10
May, 2024
8
August, 2017
7
November, 2022
4
February, 2023
4
October, 2019
3
May, 2022
3
November, 2019
3
November, 2020
2
January, 2021
2
March, 2024
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
May, 2019
Available data
508
bed bed3+
113
tsv
79
bed bed9
73
bigWig
10
bigBed bed9
7
txt
1
bigBed narrowPeak
Organism
732
Homo sapiens
Biosample type
397
primary cell
194
tissue
90
cell line
50
in vitro differentiated cells
1
stem cell
Organ
952
epithelium
652
kidney
466
brain
465
connective tissue
375
musculature of body
308
lung
289
intestine
277
pancreas
266
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
202
blood vessel
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
lymphatic vessel
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
15
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
636
AMP
53
ENCODE
35
KPMP
LungMap
4
ITG
2
T1D
2
community
Genome assembly (visualization)
613
hg19
215
GRCh38
2
hg18
award.project!
LungMap
BIOSAMPLE
TYPE
732 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
3
4
16
1
2
6
pericyte cell
3
10
9
1
endothelial cell of umbilical vein
6
4
2
5
2
1
osteoblast
2
2
5
1
2
3
2
endothelial cell of hepatic sinusoid
6
4
6
+ See 62 more…
tissue
adipose tissue
7
8
2
6
3
1
4
1
coronary artery
3
3
3
3
1
2
2
3
1
subcutaneous adipose tissue
2
2
1
5
6
1
1
3
tibial artery
3
2
3
3
1
2
2
3
omental fat pad
5
2
2
2
2
2
3
+ See 17 more…
cell line
22Rv1
4
2
2
1
1
GM23248
2
1
1
1
1
1
LNCaP clone FGC
3
2
2
PC-3
2
1
1
1
1
1
RWPE1
2
1
1
1
1
1
+ See 19 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
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