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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
ChIP-seq
Assay category
106
DNA binding
Target of assay
339
transcription factor
109
control
106
histone modification
105
histone
82
recombinant protein
63
narrow histone mark
59
RNA binding protein
42
broad histone mark
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
33
August, 2017
27
May, 2020
17
December, 2017
15
November, 2017
7
October, 2019
6
August, 2021
1
June, 2019
Available data
84
bigWig
82
bed narrowPeak
81
bam
58
tagAlign
45
fastq
36
bigBed narrowPeak
14
bed broadPeak
14
bigBed broadPeak
3
bed bed3+
Organism
106
Homo sapiens
Biosample type
72
tissue
18
cell line
12
in vitro differentiated cells
4
primary cell
Organ
187
brain
151
pancreas
103
liver
97
heart
93
epithelium
78
connective tissue
71
vasculature
70
blood vessel
49
limb
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
15
vein
12
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
106
AMP
Genome assembly (visualization)
84
hg19
71
GRCh38
Lab
103
AMP-T2D consortium
3
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
12
inconsistent control read length
award.project!
LungMap
BIOSAMPLE
ASSAY
106 results
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Clear Filters
ChIP-seq
tissue
liver
65
right lobe of liver
5
islet of Langerhans
2
cell line
HepG2
18
in vitro differentiated cells
hepatocyte
12
primary cell
hepatocyte
3
retinal pigment epithelial cell
1
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