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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
384
candidate regulatory elements
266
target gene predictions
265
gene expression
236
accessible chromatin
197
chromatin state
93
differential activity
59
binding sites
48
variant allelic effects
39
histone modifications
11
eQTL
6
Fine-mapped variants
4
caQTL
Date released
562
September, 2022
356
February, 2021
155
September, 2023
138
November, 2021
91
February, 2024
44
May, 2021
38
March, 2023
37
June, 2020
24
August, 2021
20
May, 2020
19
January, 2020
16
March, 2020
15
February, 2020
15
November, 2022
13
October, 2022
12
February, 2023
10
May, 2024
8
April, 2020
7
August, 2017
6
August, 2018
6
October, 2019
5
March, 2024
5
May, 2022
2
January, 2022
2
May, 2019
1
July, 2020
1
November, 2019
Available data
1041
bed bed3+
339
tsv
190
bed bed9
183
bigWig
78
txt
14
bigBed narrowPeak
6
csv
5
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1608
Homo sapiens
Biosample type
876
primary cell
548
tissue
156
cell line
28
in vitro differentiated cells
Organ
939
epithelium
652
kidney
466
brain
466
connective tissue
375
musculature of body
311
lung
289
intestine
269
vasculature
257
heart
257
pancreas
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
87
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1305
AMP
155
KPMP
138
ENCODE
T1D
8
LungMap
2
community
Genome assembly (visualization)
1249
hg19
410
GRCh38
award.project!
T1D
BIOSAMPLE
TYPE
1608 results
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Clear Filters
candidate regulatory elements
target gene predictions
gene expression
accessible chromatin
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
3
6
9
14
2
2
1
1
2
hepatocyte
2
3
13
8
1
1
2
4
epithelial cell of proximal tubule
2
1
16
1
1
1
1
glomerular endothelial cell
2
1
14
2
1
1
endothelial cell of umbilical vein
6
4
2
5
2
1
+ See 157 more…
tissue
lung
33
17
1
16
1
muscle of arm
33
16
1
16
1
muscle of leg
27
14
2
15
muscle of back
28
13
13
left lung
26
13
13
+ See 42 more…
cell line
A549
21
19
1
18
2
1
EndoC_BH1
1
8
8
3
1
IMR-90
2
2
1
1
2
1
PC-9
2
2
1
1
1
1
LHCN-M2
2
1
1
1
1
1
+ See 17 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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