Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Embedding Matrix
Click or enter search terms to filter the experiments included in the matrix.
Embeddings type
52
Gene expression
10
Accessible chromatin
Date released
32
May, 2022
9
June, 2025
6
April, 2025
4
February, 2025
2
October, 2024
2
September, 2021
1
February, 2021
1
February, 2023
1
March, 2023
1
March, 2024
1
November, 2021
1
September, 2020
1
September, 2023
Available data
45
h5ad
13
rds
8
tsv
7
mtx
1
bed bed3
1
cloupe
1
tbi
Organism
59
Homo sapiens
Biosample type
56
tissue
5
primary cell
Organ
7
musculature of body
7
pancreas
5
liver
5
vasculature
4
artery
4
blood vessel
4
connective tissue
4
heart
3
adipose tissue
3
kidney
3
lung
2
bone element
2
epithelium
2
intestine
2
mouth
1
blood
1
bodily fluid
1
bone marrow
1
brain
1
eye
1
large intestine
1
lymph node
1
mammary gland
1
prostate gland
1
skin of body
1
small intestine
1
spleen
1
thymus
1
tongue
1
trachea
1
uterus
Project
57
AMP
2
LungMap
T1D
2
community
1
ENCODE
Genome assembly (visualization)
1
hg19
award.project!
T1D
biosample_term_name!
subcutaneous adipose tissue
BIOSAMPLE
TYPE
62 results
search-icon
table-tab-icon
Clear Filters
Gene expression
Accessible chromatin
tissue
heart
5
liver
4
1
artery
3
1
islet of Langerhans
1
3
skeletal muscle
3
1
+ See 27 more…
primary cell
cell
1
endothelial cell
1
epithelial cell
1
immune system
1
stromal cell
1
See all biosamples