Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
total RNA-seq
19
ATAC-seq
13
ChIP-seq
6
MeRIP-seq
2
Capture-C
1
CRISPR genome editing followed by sgRNA sequencing
1
Hi-C
Assay category
31
Transcription
19
DNA accessibility
13
DNA binding
1
3D chromatin structure
Target of assay
10
histone
10
histone modification
6
broad histone mark
5
control
4
narrow histone mark
3
nucleotide modification
1
RNA binding protein
1
transcription factor
Date released
26
February, 2021
20
May, 2021
16
November, 2019
6
November, 2020
2
August, 2021
2
March, 2020
1
February, 2023
Available data
45
bam
44
bigWig
32
tsv
12
bed narrowPeak
1
bedpe bed3+
1
hic
Organism
72
Homo sapiens
Biosample type
73
cell line
Organ
73
epithelium
73
pancreas
Project
73
AMP
T1D
Genome assembly (visualization)
46
hg19
43
GRCh38
Lab
67
AMP-T2D consortium
6
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
72
inconsistent ontology term
award.project!
T1D
BIOSAMPLE
ASSAY
73 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
MeRIP-seq
Capture-C
CRISPR genome editing followed by sgRNA sequencing
Hi-C
cell line
EndoC_BH1
31
19
13
6
2
1
1
Download