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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
DNase-seq
19
ChIP-seq
Assay category
32
DNA accessibility
19
DNA binding
Target of assay
19
histone
19
histone modification
12
broad histone mark
7
narrow histone mark
Date released
32
June, 2019
13
August, 2017
6
May, 2019
Available data
57
bigWig
51
bed narrowPeak
45
bed broadPeak
44
bam
38
bigBed narrowPeak
33
bed bed3+
32
bigBed broadPeak
15
tagAlign
7
tsv
3
bed bedMethyl
3
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
1
txt
Organism
51
Homo sapiens
Biosample type
51
tissue
9
primary cell
Organ
192
brain
173
heart
153
kidney
121
pancreas
113
liver
100
blood vessel
100
vasculature
92
limb
62
artery
51
musculature of body
30
eye
27
nerve
18
ureter
14
spleen
13
adipose tissue
13
connective tissue
12
epithelium
8
bone element
8
skeleton
1
pituitary gland
Project
51
AMP
Genome assembly (visualization)
51
hg19
37
GRCh38
Lab
51
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
award.project!
T1D
lab.title!
Klaus Kaestner, Upenn
BIOSAMPLE
ASSAY
51 results
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DNase-seq
ChIP-seq
tissue
muscle of leg
13
6
muscle of arm
17
skeletal muscle tissue
13
forelimb muscle
1
hindlimb muscle
1
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