Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Embedding Matrix
Click or enter search terms to filter the experiments included in the matrix.
Embeddings type
54
Gene expression
11
Accessible chromatin
Date released
32
May, 2022
10
June, 2025
8
April, 2025
4
February, 2025
2
October, 2024
2
September, 2021
1
February, 2021
1
February, 2023
1
March, 2023
1
March, 2024
1
November, 2021
1
September, 2020
1
September, 2023
Available data
47
h5ad
14
rds
9
tsv
7
mtx
1
bed bed3
1
cloupe
1
tbi
Organism
62
Homo sapiens
Biosample type
59
tissue
5
primary cell
Organ
7
connective tissue
7
musculature of body
7
pancreas
6
adipose tissue
5
liver
5
vasculature
4
artery
4
blood vessel
4
heart
3
kidney
3
lung
2
bone element
2
epithelium
2
intestine
2
mouth
1
blood
1
bodily fluid
1
bone marrow
1
brain
1
eye
1
large intestine
1
lymph node
1
mammary gland
1
prostate gland
1
skin of body
1
small intestine
1
spleen
1
thymus
1
tongue
1
trachea
1
uterus
Project
60
AMP
2
LungMap
T1D
2
community
1
ENCODE
Genome assembly (visualization)
1
hg19
award.project!
T1D
files.file_type!!
tsv
BIOSAMPLE
TYPE
65 results
search-icon
table-tab-icon
Clear Filters
Gene expression
Accessible chromatin
tissue
heart
5
liver
4
1
artery
3
1
islet of Langerhans
1
3
skeletal muscle
3
1
+ See 28 more…
primary cell
cell
1
endothelial cell
1
epithelial cell
1
immune system
1
stromal cell
1
See all biosamples