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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
ChIP-seq
10
snATAC-seq
9
single cell RNA-seq
1
Hi-C
Assay category
34
DNA binding
10
DNA accessibility
9
Transcription
1
3D chromatin structure
Target of assay
28
transcription factor
4
control
2
RNA binding protein
2
chromatin remodeller
Date released
715
February, 2021
370
August, 2017
336
November, 2017
319
August, 2021
305
October, 2019
296
May, 2020
246
May, 2021
200
May, 2022
182
February, 2023
168
July, 2018
120
May, 2019
108
July, 2019
94
December, 2017
80
April, 2019
79
November, 2018
76
October, 2018
73
September, 2018
61
November, 2019
59
September, 2020
57
March, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
31
June, 2019
30
January, 2019
25
February, 2020
19
April, 2020
19
October, 2017
15
May, 2023
15
November, 2020
September, 2017
10
December, 2019
8
January, 2018
7
August, 2020
5
March, 2023
4
August, 2018
4
March, 2019
4
October, 2022
3
June, 2018
1
August, 2022
Available data
35
fastq
34
bam
30
bed narrowPeak
30
bigBed narrowPeak
30
bigWig
Organism
53
Homo sapiens
Biosample type
28
cell line
26
tissue
Organ
27
blood
27
bodily fluid
19
lung
7
spleen
1
liver
Project
35
AMP
19
LungMap
Genome assembly (visualization)
30
GRCh38
30
hg19
Lab
35
AMP-T2D consortium
19
Xin Sun, UCSD
Audit category:
1
inconsistent control
award.project!
T1D
files.file_type!
bed broadPeak
month_released!
September, 2017
BIOSAMPLE
ASSAY
54 results
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Clear Filters
ChIP-seq
snATAC-seq
single cell RNA-seq
Hi-C
cell line
GM12878
27
HepG2
1
tissue
lung
10
9
spleen
7
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