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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
22
ChIP-seq
4
ATAC-seq
1
Hi-C
Assay category
22
DNA binding
4
DNA accessibility
1
3D chromatin structure
Target of assay
21
control
1
histone
1
histone modification
1
narrow histone mark
Date released
272
August, 2021
180
May, 2022
179
February, 2023
164
February, 2021
August, 2017
107
October, 2019
81
May, 2020
79
May, 2021
72
November, 2017
56
September, 2020
47
September, 2023
42
March, 2020
30
November, 2019
29
October, 2018
25
February, 2020
23
July, 2019
23
May, 2019
22
December, 2017
19
April, 2020
15
April, 2019
15
May, 2023
11
November, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
September, 2018
Available data
95
bam
95
fastq
72
bed narrowPeak
bigWig
50
bigBed narrowPeak
15
bed bed3+
1
bed broadPeak
1
bedpe
1
hic
Organism
27
Homo sapiens
Biosample type
17
tissue
9
in vitro differentiated cells
1
stem cell
Organ
13
liver
5
embryo
5
pancreas
3
epithelium
Project
27
AMP
Genome assembly (visualization)
8
hg19
7
GRCh38
Lab
22
AMP-T2D consortium
2
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
Audit category:
2
inconsistent ontology term
Audit category:
1
missing controlled_by
award.project!
T1D
files.file_type!
bigWig
month_released!
August, 2017
BIOSAMPLE
ASSAY
27 results
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Clear Filters
ChIP-seq
ATAC-seq
Hi-C
tissue
liver
9
islet of Langerhans
4
1
right lobe of liver
3
in vitro differentiated cells
pancreatic endoderm
3
Hepatic endoderm
2
Posterior foregut
1
definitive endodermal cell
1
hepatocyte
1
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stem cell
hESC
1
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