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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1508
candidate regulatory elements
1241
target gene predictions
969
histone modifications
809
binding sites
787
accessible chromatin
111
variant allelic effects
39
chromatin state
11
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2305
February, 2021
1522
September, 2022
320
November, 2021
289
February, 2024
280
May, 2021
273
June, 2020
125
May, 2020
97
October, 2022
58
January, 2020
52
August, 2021
44
March, 2020
33
August, 2017
19
April, 2020
19
November, 2022
15
May, 2022
11
November, 2019
9
October, 2019
6
February, 2023
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5497
bed bed3+
879
tsv
787
bed bed9
463
bigWig
108
txt
36
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5452
Homo sapiens
Biosample type
2110
cell line
1537
tissue
1504
primary cell
341
in vitro differentiated cells
4
stem cell
Organ
527
epithelium
328
connective tissue
309
brain
309
kidney
281
musculature of body
239
lung
228
intestine
190
bodily fluid
181
blood
178
embryo
limb
173
heart
165
skin of body
163
vasculature
139
pancreas
137
large intestine
123
blood vessel
112
extraembryonic component
101
liver
eye
stomach
76
uterus
73
mammary gland
68
bone element
64
small intestine
63
prostate gland
57
adrenal gland
56
placenta
54
lymph node
54
penis
51
ureter
49
adipose tissue
46
artery
38
thymus
37
gonad
33
esophagus
29
spinal cord
26
spleen
19
testis
18
lymphoid tissue
17
ovary
17
thyroid gland
17
vein
15
skeleton
14
bronchus
14
lymphatic vessel
14
nerve
13
mouth
11
pituitary gland
9
bone marrow
9
breast
7
tongue
7
urinary bladder
6
vagina
5
trachea
3
nose
Project
5157
AMP
320
ENCODE
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5491
hg19
768
GRCh38
1
hg18
award.project!
T1D
organ_slims!
eye
limb
stomach
BIOSAMPLE
TYPE
5497 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
1
H1-hESC
1
39
1
2
1
K562
7
23
1
2
1
1
MCF-7
9
6
2
3
1
+ See 756 more…
tissue
heart
37
20
1
1
5
2
kidney
29
14
2
1
10
1
1
brain
29
16
3
1
2
1
lung
33
17
small intestine
29
17
1
+ See 187 more…
primary cell
monocyte
1
86
1
17
1
1
CD8-positive, alpha-beta T cell
7
4
30
3
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
6
1
2
14
2
2
1
+ See 312 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
1
4
4
mesenchymal stem cell
3
3
1
1
1
T-cell acute lymphoblastic leukemia
5
3
+ See 102 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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