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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
107
ChIP-seq
34
DNase-seq
2
FAIRE-seq
Assay category
107
DNA binding
36
DNA accessibility
Target of assay
104
histone
104
histone modification
65
broad histone mark
39
narrow histone mark
3
RNA binding protein
3
transcription factor
Date released
64
November, 2017
30
June, 2019
25
May, 2019
15
October, 2019
6
October, 2017
2
November, 2018
1
July, 2019
Available data
263
bam
237
bigWig
216
bed narrowPeak
140
bigBed narrowPeak
118
tagAlign
51
bed broadPeak
42
bigBed broadPeak
37
bed bed3+
26
tsv
21
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
2
hic
1
bed bed3
1
bedpe bed3+
1
tagAlign bed3+
1
tar
Organism
143
Homo sapiens
Biosample type
117
tissue
26
primary cell
Organ
364
liver
128
brain
104
kidney
99
pancreas
94
heart
85
vasculature
84
limb
81
blood vessel
78
epithelium
60
musculature of body
54
blood
54
bodily fluid
29
connective tissue
26
nerve
25
artery
18
ureter
15
vein
13
spleen
11
adipose tissue
6
eye
Project
143
AMP
Genome assembly (visualization)
138
GRCh38
81
hg19
Lab
143
AMP-T2D consortium
Audit category:
3
missing controlled_by
award.project!
T1D
BIOSAMPLE
ASSAY
143 results
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ChIP-seq
DNase-seq
FAIRE-seq
tissue
brain
6
14
layer of hippocampus
16
caudate nucleus
12
1
temporal lobe
13
angular gyrus
12
+ See 14 more…
primary cell
endothelial cell of umbilical vein
12
2
1
astrocyte of the cerebellum
2
1
brain microvascular endothelial cell
2
1
choroid plexus epithelial cell
2
1
astrocyte of the hippocampus
1
+ See 1 more…
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