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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
Assay category
70
DNA binding
Target of assay
53
control
17
histone
17
histone modification
10
broad histone mark
7
narrow histone mark
Date released
August, 2017
23
May, 2020
21
November, 2017
9
October, 2019
8
August, 2021
8
October, 2017
February, 2021
1
May, 2021
Available data
2352
bam
bigWig
1564
bed narrowPeak
1026
fastq
1000
bigBed narrowPeak
854
tsv
281
bed broadPeak
270
bigBed broadPeak
238
bed bed3+
221
tagAlign
153
zippedFastqFolder
72
txt
64
xls
30
bed bedMethyl
30
bigBed bedMethyl
23
bedpe bed3+
23
hic
10
bed bed3
5
hdf5
4
tar
3
bed bedgraph
3
cool
2
csv
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
70
Homo sapiens
Biosample type
61
tissue
8
in vitro differentiated cells
1
primary cell
Organ
36
brain
24
liver
2
epithelium
1
pancreas
Project
70
AMP
Genome assembly (visualization)
1
GRCh38
Lab
70
AMP-T2D consortium
Audit category:
1
missing controlled_by
award.project!
T1D
files.file_type!
bigWig
month_released!
August, 2017
February, 2021
BIOSAMPLE
ASSAY
70 results
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ChIP-seq
tissue
liver
23
brain
8
cingulate gyrus
8
layer of hippocampus
4
substantia nigra
4
+ See 11 more…
in vitro differentiated cells
neural progenitor cell
7
pancreatic PP cell
1
primary cell
hepatocyte
1
See all biosamples
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