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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
72
total RNA-seq
6
single cell RNA-seq
2
pCHi-C
2
small RNA-seq
Assay category
80
Transcription
Date released
52
February, 2021
9
July, 2019
6
August, 2021
6
February, 2020
5
March, 2020
4
October, 2019
Available data
290
bam
254
bigWig
226
bed narrowPeak
156
bigBed narrowPeak
82
tsv
65
bed broadPeak
52
bigBed broadPeak
49
bed bed3+
21
tagAlign
8
fastq
6
bed bedMethyl
6
bigBed bedMethyl
5
hic
4
bedpe bed3+
2
hdf5
1
tar
1
txt
Organism
82
Homo sapiens
Biosample type
52
cell line
26
tissue
4
primary cell
Organ
478
connective tissue
415
pancreas
401
adipose tissue
174
liver
168
heart
154
epithelium
68
blood vessel
68
vasculature
58
artery
58
bone element
26
brain
24
kidney
14
embryo
9
musculature of body
7
limb
5
eye
5
nerve
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
82
AMP
Genome assembly (visualization)
68
GRCh38
68
hg19
Lab
82
AMP-T2D consortium
award.project!
T1D
BIOSAMPLE
ASSAY
82 results
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total RNA-seq
single cell RNA-seq
pCHi-C
small RNA-seq
cell line
smooth muscle cell of the coronary artery
52
tissue
aorta
1
4
1
tibial nerve
5
psoas muscle
2
1
ascending aorta
2
pulmonary artery
2
+ See 6 more…
primary cell
skeletal muscle satellite cell
1
1
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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