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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
78
ChIP-seq
Assay category
78
DNA binding
Target of assay
147
histone
147
histone modification
78
broad histone mark
69
narrow histone mark
53
control
19
transcription factor
9
RNA binding protein
5
nucleotide modification
Date released
32
August, 2017
19
October, 2018
17
September, 2018
6
November, 2019
4
October, 2019
Available data
73
bigWig
70
bam
68
bed narrowPeak
52
fastq
30
bigBed narrowPeak
8
bed broadPeak
8
tagAlign
6
bed bed3+
Organism
74
Homo sapiens
Biosample type
41
tissue
27
primary cell
10
cell line
Organ
78
pancreas
70
brain
57
heart
45
blood vessel
45
vasculature
44
connective tissue
44
epithelium
42
liver
34
limb
20
adipose tissue
20
musculature of body
16
nerve
15
kidney
14
artery
9
vein
4
embryo
4
spleen
Project
78
AMP
Genome assembly (visualization)
73
hg19
69
GRCh38
Lab
78
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
Audit category:
22
missing controlled_by
Audit category:
3
inconsistent control read length
1
inconsistent assembly
award.project!
T1D
month_released!
October, 2022
BIOSAMPLE
ASSAY
78 results
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Clear Filters
ChIP-seq
tissue
islet of Langerhans
14
body of pancreas
11
endocrine pancreas
8
pancreas
8
primary cell
pancreatic endocrine cell
11
pancreatic ductal cell
6
pancreatic acinar cell
4
pancreatic alpha cell
3
pancreatic beta cell
3
cell line
EndoC_BH1
6
Panc1
4
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