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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
273
gene expression
219
accessible chromatin
151
candidate regulatory elements
141
target gene predictions
95
differential activity
81
chromatin state
50
variant allelic effects
49
binding sites
32
histone modifications
22
eQTL
15
Fine-mapped variants
5
caQTL
Date released
238
February, 2021
211
September, 2022
155
September, 2023
127
November, 2021
79
February, 2024
39
May, 2021
38
March, 2023
30
August, 2021
28
June, 2020
25
January, 2020
25
March, 2020
25
May, 2020
18
February, 2020
16
February, 2023
16
November, 2022
10
May, 2024
7
April, 2020
7
October, 2019
7
October, 2022
6
August, 2018
6
January, 2022
5
August, 2017
4
November, 2019
3
March, 2024
2
May, 2022
2
September, 2018
1
January, 2018
1
July, 2020
1
May, 2019
Available data
650
bed bed3+
365
tsv
180
bigWig
78
txt
76
bed bed9
14
bigBed narrowPeak
9
bigBed bed9
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
1133
Homo sapiens
Biosample type
827
primary cell
229
tissue
50
cell line
27
in vitro differentiated cells
Organ
939
epithelium
652
kidney
466
brain
466
connective tissue
375
musculature of body
311
lung
289
intestine
269
vasculature
257
heart
257
pancreas
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
87
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
842
AMP
155
KPMP
127
ENCODE
T1D
7
LungMap
2
community
Genome assembly (visualization)
750
hg19
311
GRCh38
2
hg18
award.project!
T1D
BIOSAMPLE
TYPE
1133 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
chromatin state
variant allelic effects
binding sites
histone modifications
eQTL
Fine-mapped variants
caQTL
primary cell
endothelial cell
9
14
3
6
2
2
1
1
2
hepatocyte
13
8
2
3
1
2
1
4
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
1
2
+ See 151 more…
tissue
adipose tissue
3
2
7
8
6
1
1
4
coronary artery
1
3
3
3
3
2
2
3
1
subcutaneous adipose tissue
5
2
2
1
1
1
6
3
pigmented layer of retina
20
tibial artery
1
3
3
2
3
2
2
3
+ See 32 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
smooth muscle cell of the coronary artery
1
1
1
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
+ See 9 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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