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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
254
gene expression
199
accessible chromatin
109
target gene predictions
106
candidate regulatory elements
92
differential activity
51
chromatin state
41
binding sites
40
variant allelic effects
27
histone modifications
3
eQTL
2
caQTL
Date released
191
February, 2021
155
September, 2023
145
September, 2022
125
November, 2021
75
February, 2024
38
March, 2023
34
May, 2021
24
June, 2020
23
August, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
10
February, 2020
10
May, 2024
6
April, 2020
6
August, 2018
6
March, 2020
6
October, 2022
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
Available data
523
bed bed3+
324
tsv
164
bigWig
78
txt
48
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
924
Homo sapiens
Biosample type
794
primary cell
61
tissue
43
cell line
26
in vitro differentiated cells
Organ
939
epithelium
652
kidney
466
brain
466
connective tissue
375
musculature of body
311
lung
289
intestine
269
vasculature
257
heart
257
pancreas
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
158
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
87
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
bronchus
13
breast
13
pituitary gland
11
bone marrow
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
636
AMP
155
KPMP
125
ENCODE
T1D
6
LungMap
2
community
Genome assembly (visualization)
574
hg19
240
GRCh38
award.project!
T1D
organ_slims!
bronchus
tongue
BIOSAMPLE
TYPE
924 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
14
6
3
2
2
1
1
2
hepatocyte
13
8
3
2
1
1
2
4
epithelial cell of proximal tubule
16
1
1
2
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
endothelial cell of umbilical vein
2
4
6
5
2
1
+ See 144 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
kidney epithelium
1
1
pancreatic ductal cell
2
+ See 15 more…
cell line
EndoC_BH1
8
8
1
3
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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