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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
RRBS
4
Hi-C
4
WGBS
3
single cell RNA-seq
2
RNA microarray
Assay category
19
DNA methylation
4
3D chromatin structure
3
Transcription
Date released
272
August, 2021
202
February, 2023
180
May, 2022
164
February, 2021
139
August, 2017
107
October, 2019
96
May, 2021
81
May, 2020
72
November, 2017
56
September, 2020
47
September, 2023
44
March, 2020
30
November, 2019
29
October, 2018
25
February, 2020
23
July, 2019
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
11
November, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2019
4
January, 2019
4
July, 2018
4
October, 2022
1
August, 2018
1
August, 2022
1
March, 2023
1
September, 2018
Available data
bigWig
87
bam
74
tsv
23
bed bedMethyl
23
bigBed bedMethyl
7
bed narrowPeak
4
bed bed3+
4
hdf5
2
bigBed narrowPeak
Organism
28
Homo sapiens
Biosample type
17
tissue
9
primary cell
2
in vitro differentiated cells
Organ
7
epithelium
7
kidney
5
musculature of body
4
heart
4
limb
2
brain
2
liver
2
pancreas
2
vasculature
1
blood vessel
1
connective tissue
1
eye
1
pericardium
Project
28
AMP
Genome assembly (visualization)
15
hg19
Lab
28
AMP-T2D consortium
Audit category:
4
audit script error
4
inconsistent ontology term
award.project!
community
files.file_type!
bigWig
BIOSAMPLE
ASSAY
28 results
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Clear Filters
RRBS
Hi-C
WGBS
single cell RNA-seq
RNA microarray
tissue
gastrocnemius medialis
4
heart left ventricle
1
2
kidney
1
1
aorta
1
brain
1
+ See 6 more…
primary cell
cardiac fibroblast
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
epithelial cell of proximal tubule
1
hepatocyte
1
+ See 4 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
2
See all biosamples
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