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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
total RNA-seq
20
ChIP-seq
4
DNase-seq
2
ATAC-seq
Assay category
54
Transcription
20
DNA binding
6
DNA accessibility
Target of assay
20
histone
20
histone modification
14
broad histone mark
6
narrow histone mark
transcription factor
1
RNA binding protein
Date released
52
February, 2021
21
October, 2019
3
July, 2019
2
June, 2019
2
May, 2019
Available data
97
bam
80
bigWig
69
bed narrowPeak
58
tsv
24
bigBed narrowPeak
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
2
tagAlign
Organism
80
Homo sapiens
Biosample type
52
cell line
26
tissue
2
primary cell
Organ
604
pancreas
530
connective tissue
408
adipose tissue
292
epithelium
289
liver
219
brain
207
heart
146
vasculature
142
blood vessel
122
kidney
91
limb
80
artery
68
musculature of body
58
bone element
31
nerve
26
embryo
18
ureter
15
vein
10
spleen
5
eye
4
blood
4
bodily fluid
1
pericardium
1
pituitary gland
Project
80
AMP
Genome assembly (visualization)
80
GRCh38
80
hg19
Lab
80
AMP-T2D consortium
award.project!
community
target.investigated_as!
nucleotide modification
transcription factor
BIOSAMPLE
ASSAY
80 results
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total RNA-seq
ChIP-seq
DNase-seq
ATAC-seq
cell line
smooth muscle cell of the coronary artery
52
tissue
tibial artery
18
2
1
coronary artery
2
2
1
primary cell
endothelial cell of coronary artery
1
smooth muscle cell of the coronary artery
1
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