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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
Hi-C
3
single cell RNA-seq
Assay category
3
3D chromatin structure
3
Transcription
Date released
2
July, 2019
1
February, 2021
1
November, 2018
1
October, 2019
1
September, 2018
Available data
2964
bam
2767
bigWig
1506
bed narrowPeak
1428
tsv
1101
fastq
879
bigBed narrowPeak
391
tagAlign
232
bed broadPeak
195
bigBed broadPeak
184
bed bed3+
99
txt
73
zippedFastqFolder
29
bed bedMethyl
29
bigBed bedMethyl
18
bedpe bed3+
16
hic
12
bed bed3
7
bed bedgraph
3
csv
3
hdf5
3
tar
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
6
Homo sapiens
Biosample type
4
primary cell
1
cell line
1
tissue
Organ
kidney
3
brain
2
blood vessel
epithelium
2
liver
2
vasculature
1
connective tissue
1
pancreas
Project
6
AMP
Genome assembly (visualization)
3
hg19
1
GRCh38
Lab
6
AMP-T2D consortium
Audit category:
1
inconsistent assembly
award.project!
community
organ_slims!
epithelium
kidney
BIOSAMPLE
ASSAY
6 results
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Clear Filters
Hi-C
single cell RNA-seq
primary cell
pancreatic cell
2
astrocyte of the cerebellum
1
brain pericyte
1
cell line
Panc1
1
tissue
liver
1
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