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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
54
DNA binding
9
DNA accessibility
Target of assay
51
transcription factor
10
RNA binding protein
10
chromatin remodeller
control
1
histone
1
histone modification
1
narrow histone mark
Date released
27
December, 2018
15
January, 2019
12
November, 2018
8
January, 2021
1
January, 2018
Available data
55
bigWig
54
bam
54
bed narrowPeak
54
bigBed narrowPeak
54
fastq
Organism
63
Homo sapiens
Biosample type
55
cell line
8
primary cell
Organ
888
pancreas
683
liver
649
connective tissue
491
epithelium
467
adipose tissue
373
heart
342
kidney
255
brain
214
vasculature
209
blood vessel
159
bone element
132
artery
105
limb
90
musculature of body
63
blood
63
bodily fluid
60
eye
32
nerve
30
embryo
20
lung
20
vein
18
ureter
17
spleen
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
55
AMP
8
T1D
Genome assembly (visualization)
55
hg19
54
GRCh38
Lab
55
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
award.project!
community
target.investigated_as!
control
nucleotide modification
BIOSAMPLE
ASSAY
63 results
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ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
54
1
primary cell
peripheral blood mononuclear cell
8
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