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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
145
candidate regulatory elements
143
target gene predictions
76
chromatin state
62
accessible chromatin
50
gene expression
44
binding sites
35
histone modifications
19
eQTL
16
variant allelic effects
8
differential activity
6
Fine-mapped variants
2
caQTL
Date released
201
September, 2022
161
February, 2021
69
February, 2024
30
June, 2020
23
May, 2021
15
August, 2021
13
October, 2022
10
January, 2020
10
March, 2020
10
May, 2020
10
May, 2024
9
February, 2020
8
August, 2017
7
March, 2023
7
November, 2022
6
January, 2022
3
May, 2022
3
November, 2020
2
October, 2019
2
September, 2018
2
September, 2023
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
457
bed bed3+
68
bed bed9
60
tsv
19
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
606
Homo sapiens
Biosample type
241
primary cell
158
cell line
126
tissue
79
in vitro differentiated cells
2
stem cell
Organ
650
epithelium
509
kidney
466
brain
394
connective tissue
364
musculature of body
299
lung
270
intestine
247
heart
244
limb
239
pancreas
225
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
153
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
15
lymphatic vessel
13
breast
13
bronchus
13
pituitary gland
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
604
AMP
52
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
538
hg19
158
GRCh38
2
hg18
BIOSAMPLE
TYPE
606 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
primary cell
trophoblast cell
7
5
4
1
1
osteoblast
2
2
1
5
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
fibroblast
3
2
1
2
6
+ See 40 more…
cell line
H1-hESC
1
39
1
1
8
2
1
H9
7
8
1
GM23248
2
1
1
1
1
1
H7-hESC
1
2
1
1
1
HUES6
2
1
1
1
1
+ See 26 more…
tissue
adipose tissue
7
8
6
2
3
1
4
1
subcutaneous adipose tissue
2
1
2
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
chorionic villus
8
4
4
trophoblast
4
3
2
1
1
+ See 12 more…
in vitro differentiated cells
adipocyte
4
6
6
4
1
1
1
mesenchymal stem cell
3
3
2
1
1
1
endodermal cell
4
2
2
mesodermal cell
4
1
1
1
chondrocyte
5
+ See 15 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
See all biosamples
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