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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
143
candidate regulatory elements
92
target gene predictions
78
chromatin state
56
accessible chromatin
40
gene expression
32
binding sites
29
histone modifications
20
eQTL
16
variant allelic effects
8
differential activity
6
Fine-mapped variants
2
caQTL
Date released
210
September, 2022
139
February, 2021
24
June, 2020
19
May, 2021
18
February, 2024
12
October, 2022
10
January, 2020
10
May, 2020
10
May, 2024
9
February, 2020
9
March, 2020
7
August, 2017
7
August, 2021
7
January, 2022
7
March, 2023
7
November, 2022
3
May, 2022
3
November, 2020
2
October, 2019
2
September, 2018
2
September, 2023
1
August, 2018
1
February, 2023
1
January, 2018
1
June, 2021
Available data
379
bed bed3+
71
bed bed9
50
tsv
19
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
522
Homo sapiens
Biosample type
243
primary cell
189
tissue
55
in vitro differentiated cells
34
cell line
1
stem cell
Organ
650
epithelium
509
kidney
466
brain
394
connective tissue
364
musculature of body
299
lung
270
intestine
247
heart
244
limb
239
pancreas
225
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
153
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
15
lymphatic vessel
13
breast
13
bronchus
13
pituitary gland
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
520
AMP
53
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
2
community
Genome assembly (visualization)
463
hg19
111
GRCh38
2
hg18
BIOSAMPLE
TYPE
522 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
Fine-mapped variants
caQTL
primary cell
trophoblast cell
7
5
4
1
1
osteoblast
2
2
1
5
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
fibroblast
3
2
1
2
6
+ See 41 more…
tissue
placenta
26
15
14
1
1
2
1
adipose tissue
7
8
6
2
3
1
4
1
subcutaneous adipose tissue
2
1
2
5
6
1
1
3
omental fat pad
5
2
2
2
2
2
3
chorionic villus
8
4
4
+ See 12 more…
in vitro differentiated cells
adipocyte
4
6
6
4
1
1
1
mesenchymal stem cell
3
3
2
1
1
1
chondrocyte
5
trophoblast cell
2
2
1
fibroblast
1
1
+ See 9 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
HTR-8/Svneo
1
1
1
foreskin fibroblast
1
1
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
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