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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
127
total RNA-seq
43
ChIP-seq
21
ATAC-seq
Assay category
127
Transcription
43
DNA binding
21
DNA accessibility
Target of assay
21
histone
21
histone modification
16
transcription factor
11
narrow histone mark
10
broad histone mark
6
control
5
RNA binding protein
Date released
661
February, 2021
397
November, 2017
352
August, 2017
315
August, 2021
280
October, 2019
194
May, 2020
191
May, 2021
163
June, 2019
120
July, 2018
115
May, 2019
94
December, 2017
94
February, 2023
87
November, 2018
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
61
November, 2019
55
March, 2020
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
15
May, 2023
10
November, 2020
8
January, 2018
6
April, 2018
6
September, 2017
5
December, 2019
5
March, 2019
1
August, 2018
1
August, 2022
1
October, 2022
Available data
131
bigWig
127
bam
121
tsv
6
tagAlign
5
bed narrowPeak
Organism
191
Homo sapiens
Biosample type
132
in vitro differentiated cells
primary cell
39
tissue
20
cell line
Organ
60
pancreas
25
epithelium
3
heart
2
embryo
1
connective tissue
Project
191
AMP
2
T1D
Genome assembly (visualization)
131
hg19
126
GRCh38
Lab
143
AMP-T2D consortium
48
Kyle Gaulton, UCSD
Audit category:
88
inconsistent ontology term
biosample_type!
primary cell
files.file_type!
csv
organ_slims!
small intestine
BIOSAMPLE
ASSAY
191 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
in vitro differentiated cells
cardiomyocytes
59
3
embryonic stem cell
5
37
5
induced pluripotent stem cell
9
pancreatic PP cell
3
cardiac fibroblast
1
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tissue
islet of Langerhans
36
cardiac atrium
1
cardiac ventricle
1
pancreas
1
cell line
EndoC_BH1
4
16
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