Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
35
gene expression
31
differential activity
26
accessible chromatin
13
target gene predictions
8
variant allelic effects
6
candidate regulatory elements
4
binding sites
4
histone modifications
1
eQTL
Date released
39
March, 2023
28
May, 2021
15
February, 2024
12
February, 2021
12
September, 2022
7
August, 2018
5
October, 2019
3
June, 2020
1
February, 2023
1
January, 2022
1
June, 2021
1
March, 2020
1
May, 2020
1
November, 2019
1
October, 2022
Available data
59
bed bed3+
59
tsv
20
bigWig
14
bigBed narrowPeak
bed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
128
Homo sapiens
Biosample type
tissue
90
primary cell
35
cell line
3
in vitro differentiated cells
Organ
531
epithelium
260
connective tissue
192
kidney
189
bodily fluid
181
blood
158
embryo
138
skin of body
122
vasculature
120
pancreas
102
brain
91
lung
87
liver
84
blood vessel
65
mammary gland
65
uterus
54
lymph node
53
bone element
52
musculature of body
52
penis
52
prostate gland
35
extraembryonic component
34
intestine
31
eye
30
large intestine
28
heart
26
artery
18
vein
11
bronchus
10
lymphatic vessel
10
pituitary gland
9
bone marrow
9
placenta
8
gonad
7
limb
7
testis
6
mouth
6
spinal cord
5
adipose tissue
5
esophagus
5
lymphoid tissue
5
trachea
3
nose
2
stomach
1
adrenal gland
1
pericardium
1
thyroid gland
Project
128
AMP
20
ENCODE
20
T1D
2
community
Genome assembly (visualization)
61
hg19
7
GRCh38
biosample_type!
tissue
files.file_type!
bed bed9
BIOSAMPLE
TYPE
128 results
search-icon
table-tab-icon
Clear Filters
gene expression
differential activity
accessible chromatin
target gene predictions
variant allelic effects
candidate regulatory elements
binding sites
histone modifications
eQTL
primary cell
pancreatic ductal cell
3
3
3
1
1
1
2
pancreatic beta cell
3
3
4
1
1
pancreatic alpha cell
3
3
3
1
1
pancreatic acinar cell
3
3
2
1
1
pancreatic delta cell
3
3
2
1
1
+ See 13 more…
cell line
EndoC_BH1
8
1
8
1
1
NT2-D1 cell
1
1
1
2
Panc1
2
2
8988T
1
1
HPDE6-E6E7
1
1
+ See 3 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
Download