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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
ATAC-seq
4
total RNA-seq
3
ChIP-seq
1
DNAme array
Assay category
13
DNA accessibility
4
Transcription
3
DNA binding
1
DNA methylation
Target of assay
34
histone
histone modification
22
broad histone mark
12
narrow histone mark
3
control
Date released
102
May, 2020
48
July, 2018
43
April, 2018
41
September, 2018
36
June, 2019
31
July, 2019
21
August, 2017
21
May, 2021
13
October, 2019
12
February, 2023
6
November, 2017
6
November, 2020
5
December, 2019
5
September, 2017
3
August, 2018
3
February, 2021
3
June, 2018
2
May, 2019
2
October, 2018
1
August, 2021
1
March, 2020
1
November, 2018
Available data
14
bam
13
bed narrowPeak
6
bigWig
2
bed bed3+
1
tsv
Organism
21
Homo sapiens
Biosample type
111
in vitro differentiated cells
39
tissue
21
primary cell
20
cell line
Project
67
T1D
21
AMP
Genome assembly (visualization)
19
hg19
14
GRCh38
Lab
16
AMP-T2D consortium
5
Kyle Gaulton, UCSD
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
21 results
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ATAC-seq
total RNA-seq
ChIP-seq
DNAme array
primary cell
monocyte
13
1
1
CD8-positive, alpha-beta T cell
2
3
embryonic stem cell
1
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