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Schema
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
979
target gene predictions
549
accessible chromatin
366
candidate regulatory elements
362
differential activity
307
gene expression
210
histone modifications
197
chromatin state
100
binding sites
81
variant allelic effects
53
eQTL
21
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
1069
July, 2026
487
September, 2022
456
February, 2021
320
May, 2026
256
May, 2021
151
February, 2024
86
May, 2020
55
March, 2023
53
June, 2020
42
August, 2021
40
May, 2022
38
May, 2024
37
January, 2022
33
July, 2025
29
October, 2022
23
January, 2020
16
February, 2020
9
August, 2018
9
November, 2022
7
October, 2019
6
August, 2017
5
March, 2020
4
February, 2023
3
November, 2020
1
July, 2020
1
June, 2021
1
March, 2024
Available data
2327
bed bed3+
329
tsv
164
bed bed9
141
bigWig
108
txt
27
bed bed9+
16
bigBed narrowPeak
12
bed bed3
12
bed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
3192
Homo sapiens
Collection Tags
543
ENCODE-rE2G
480
EpiMap
393
HDMA
376
DGA
320
pyxis
271
T1D
216
ChIP-Atlas
211
BLUEPRINT
208
ENCODE
133
CATlas
55
HPAP
53
T2DKP
45
T2D
40
AMP
35
eQTLCatalogue
26
FNIH_projects-heart
26
T2DKP
15
CMDGA
12
FNIH_projects-liver
12
ROADMAP
6
4DN
1
GTEx
Biosample type
5942
tissue
3237
primary cell
2550
cell line
514
in vitro differentiated cells
4
stem cell
Organ
513
epithelium
466
blood
264
connective tissue
231
brain
195
heart
192
kidney
161
skin of body
130
liver
125
vasculature
112
pancreas
98
blood vessel
66
lung
64
eye
60
__MARKER__
52
adipose tissue
51
musculature of body
46
muscle organ
44
mammary gland
41
penis
40
extraembryonic component
35
thymus
32
artery
24
spleen
21
thyroid gland
20
embryo
20
vein
15
adrenal gland
13
bone element
13
bronchus
11
prostate gland
10
bone marrow
9
bodily fluid
9
placenta
8
lymphatic vessel
7
esophagus
5
trachea
4
intestine
4
mouth
4
spinal cord
3
skeleton
3
uterus
2
gonad
2
stomach
1
limb
1
pericardium
1
testis
Project
3237
AMP
333
ENCODE
281
KPMP
59
T1D
19
LungMap
4
community
Genome assembly (visualization)
1490
GRCh38
1432
hg19
Encyclopedia version
1
Adipocyte.narrowpeak.bed.gz Adipocyte.consensus_summit_features.bed.gz
1
Endothelial.narrowpeak.bed.gz Endothelial.consensus_summit_features.bed.gz
1
FAP.narrowpeak.bed.gz Mesenchymal_Stem_Cell.consensus_summit_features.bed.gz
1
Macrophage.narrowpeak.bed.gz Macrophage.consensus_summit_features.bed.gz
1
Neuromuscular_junction.narrowpeak.bed.gz Neuromuscular_junction.consensus_summit_features.bed.gz
1
Neuronal.narrowpeak.bed.gz Neuronal.consensus_summit_features.bed.gz
1
Satellite_Cell.narrowpeak.bed.gz Satellite_Cell.consensus_summit_features.bed.gz
1
Smooth_Muscle.narrowpeak.bed.gz Smooth_Muscle.consensus_summit_features.bed.gz
1
T_cell.narrowpeak.bed.gz T_cell.consensus_summit_features.bed.gz
1
Type_1.narrowpeak.bed.gz Type_1.consensus_summit_features.bed.gz
1
Type_2a.narrowpeak.bed.gz Type_2a.consensus_summit_features.bed.gz
1
Type_2x.narrowpeak.bed.gz Type_2x.consensus_summit_features.bed.gz
BIOSAMPLE
TYPE
3237 results
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target gene predictions
accessible chromatin
candidate regulatory elements
differential activity
gene expression
histone modifications
chromatin state
binding sites
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
1
17
4
15
86
1
4
2
1
1
fibroblast
24
26
3
10
1
6
2
endothelial cell
10
13
3
25
9
1
2
2
2
3
CD8-positive, alpha-beta T cell
25
2
7
3
30
1
T-cell
64
4
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