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Embedding Matrix

Click or enter search terms to filter the experiments included in the matrix.

Embeddings type
  • 51Gene expression
  • 7Accessible chromatin
Date released
  • 32May, 2022
  • 9June, 2025
  • 8April, 2025
  • 4February, 2025
  • 1February, 2023
  • 1March, 2023
  • 1March, 2024
  • 1September, 2020
  • 1September, 2023
Available data
  • 43h5ad
  • 13rds
  • 8tsv
  • 4mtx
  • 1bed bed3
  • 1cloupe
  • 1tbi
Organism
  • 58Homo sapiens
Biosample type
  • 53tissue
  • 5primary cell
Organ
  • 7musculature of body
  • 6connective tissue
  • 5adipose tissue
  • 5liver
  • 5vasculature
  • 4artery
  • 4blood vessel
  • 4heart
  • 4pancreas
  • 3kidney
  • 2bone element
  • 2epithelium
  • 2intestine
  • 2mouth
  • 1blood
  • 1bodily fluid
  • 1bone marrow
  • 1brain
  • 1eye
  • 1large intestine
  • 1lung
  • 1lymph node
  • 1mammary gland
  • 1prostate gland
  • 1skin of body
  • 1small intestine
  • 1spleen
  • 1thymus
  • 1tongue
  • 1trachea
  • 1uterus
Project
  • 58AMP
  • 2LungMap
  • 2T1D
  • 2community
Genome assembly (visualization)
  • 1hg19
embeddings_underlying_assay!
  • sciATAC-seq
BIOSAMPLE
TYPE

58 results

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Gene expression
Accessible chromatin
tissue
heart5
liver41
artery31
skeletal muscle31
kidney3
primary cell
cell1
endothelial cell1
epithelial cell1
immune system1
stromal cell1
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