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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
50
gene expression
43
accessible chromatin
41
candidate regulatory elements
35
target gene predictions
31
differential activity
24
chromatin state
18
eQTL
13
variant allelic effects
6
histone modifications
5
Fine-mapped variants
5
binding sites
2
sQTL
2
variant to gene
Date released
62
September, 2022
45
March, 2023
41
February, 2021
33
May, 2021
27
February, 2024
10
March, 2020
8
August, 2021
7
August, 2018
7
January, 2022
6
June, 2020
6
May, 2020
6
October, 2019
4
January, 2020
3
August, 2017
2
February, 2020
2
March, 2024
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
150
bed bed3+
78
tsv
36
bigWig
20
bed bed9
14
bigBed narrowPeak
bam
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
275
Homo sapiens
Biosample type
149
tissue
91
primary cell
32
cell line
3
in vitro differentiated cells
Organ
635
epithelium
509
kidney
466
brain
384
connective tissue
364
musculature of body
299
lung
270
intestine
245
heart
244
limb
234
pancreas
222
vasculature
218
bodily fluid
213
embryo
207
blood
194
skin of body
179
blood vessel
168
large intestine
150
liver
143
extraembryonic component
110
stomach
105
eye
89
adipose tissue
86
bone element
81
mammary gland
81
uterus
80
small intestine
78
prostate gland
71
placenta
70
artery
64
penis
64
ureter
63
adrenal gland
62
lymph node
48
gonad
48
thymus
43
spinal cord
41
esophagus
34
spleen
26
testis
25
nerve
24
lymphoid tissue
23
vein
21
ovary
21
thyroid gland
19
mouth
18
skeleton
13
breast
13
bronchus
13
pituitary gland
12
lymphatic vessel
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
275
AMP
22
ENCODE
20
T1D
2
community
Genome assembly (visualization)
181
hg19
53
GRCh38
files.file_type!
bam
bed gappedPeak
BIOSAMPLE
TYPE
275 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
chromatin state
eQTL
variant allelic effects
histone modifications
Fine-mapped variants
binding sites
sQTL
variant to gene
tissue
islet of Langerhans
11
6
1
3
13
1
1
2
2
2
2
body of pancreas
2
8
5
4
1
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
7
4
4
esophagus muscularis mucosa
1
5
2
2
1
+ See 12 more…
primary cell
pancreatic ductal cell
3
3
1
3
1
2
1
pancreatic beta cell
3
3
1
3
1
pancreatic acinar cell
3
2
1
3
1
pancreatic alpha cell
3
2
1
3
1
pancreatic delta cell
3
1
1
3
1
+ See 12 more…
cell line
EndoC_BH1
8
8
1
1
1
Panc1
2
2
1
8988T
1
1
1
HPDE6-E6E7
1
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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