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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1551
candidate regulatory elements
1143
target gene predictions
971
histone modifications
810
binding sites
596
accessible chromatin
370
gene expression
162
eQTL
123
variant allelic effects
75
chromatin state
74
Fine-mapped variants
48
differential activity
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Date released
2402
February, 2021
1528
September, 2022
384
May, 2021
352
February, 2024
274
June, 2020
133
May, 2020
125
March, 2020
105
January, 2022
97
October, 2022
95
August, 2021
69
January, 2020
61
March, 2023
55
February, 2020
49
May, 2022
44
November, 2022
39
May, 2024
35
August, 2017
31
February, 2023
28
March, 2024
13
November, 2019
9
August, 2018
9
October, 2019
5
September, 2023
3
November, 2020
3
September, 2018
2
January, 2018
1
April, 2019
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5243
bed bed3+
bed bed9
506
tsv
244
bigWig
38
bigBed bed9
34
bed bed9+
csv
21
txt
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5909
Homo sapiens
Biosample type
2130
cell line
1921
tissue
1495
primary cell
405
in vitro differentiated cells
4
stem cell
Organ
592
epithelium
kidney
400
brain
351
connective tissue
293
musculature of body
229
lung
221
pancreas
215
intestine
201
heart
194
limb
193
bodily fluid
193
vasculature
186
embryo
184
blood
160
skin of body
152
blood vessel
136
liver
135
large intestine
110
extraembryonic component
96
eye
87
stomach
81
adipose tissue
77
uterus
72
bone element
67
mammary gland
65
prostate gland
62
artery
61
small intestine
55
placenta
54
lymph node
54
penis
51
ureter
49
adrenal gland
40
gonad
37
thymus
35
spinal cord
34
esophagus
28
spleen
22
testis
21
nerve
19
lymphoid tissue
19
vein
17
ovary
17
thyroid gland
15
mouth
15
skeleton
13
lymphatic vessel
13
pituitary gland
11
breast
11
bronchus
9
bone marrow
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
5956
AMP
330
ENCODE
141
KPMP
60
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
5412
hg19
685
GRCh38
4
hg18
files.file_type!
bed bed9
csv
organ_slims!
kidney
BIOSAMPLE
TYPE
5956 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
accessible chromatin
gene expression
eQTL
variant allelic effects
chromatin state
Fine-mapped variants
differential activity
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
2
1
8
A549
21
19
1
2
1
K562
7
23
1
2
1
1
EndoC_BH1
1
1
1
8
8
1
1
+ See 753 more…
tissue
heart
37
20
1
1
5
3
2
stomach
40
21
1
3
1
1
brain
29
16
3
1
2
1
2
1
lung
33
17
1
1
muscle of arm
33
16
1
1
+ See 240 more…
primary cell
monocyte
1
86
1
17
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
3
30
2
3
1
common myeloid progenitor, CD34-positive
27
14
B cell
17
10
2
2
hepatocyte
2
2
4
1
7
13
2
+ See 288 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
1
4
1
4
cardiomyocytes
11
embryonic stem cell
1
1
1
6
+ See 116 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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