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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
971
histone modifications
876
candidate regulatory elements
811
binding sites
589
accessible chromatin
330
gene expression
210
target gene predictions
159
eQTL
83
variant allelic effects
74
Fine-mapped variants
70
chromatin state
43
differential activity
11
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
1
pQTL
1
representative DNase hypersensitivity sites
Date released
2507
February, 2021
September, 2022
384
May, 2021
February, 2024
289
June, 2020
152
May, 2020
128
March, 2020
106
January, 2022
99
October, 2022
98
August, 2021
83
January, 2020
64
February, 2020
61
March, 2023
49
May, 2022
44
November, 2022
39
May, 2024
35
August, 2017
31
February, 2023
30
March, 2024
13
November, 2019
9
August, 2018
9
October, 2019
5
September, 2023
3
November, 2020
3
September, 2018
2
January, 2018
1
April, 2019
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
3579
bed bed3+
550
tsv
235
bigWig
txt
40
bigBed bed9
bed bed9
34
bed bed9+
4
bigBed narrowPeak
1
bam
Organism
4202
Homo sapiens
Biosample type
1633
cell line
1217
tissue
1066
primary cell
328
in vitro differentiated cells
4
stem cell
Organ
341
epithelium
279
brain
246
connective tissue
194
kidney
168
pancreas
142
musculature of body
124
heart
123
vasculature
115
bodily fluid
110
blood
102
limb
100
intestine
96
blood vessel
91
skin of body
88
lung
81
embryo
78
liver
77
eye
67
large intestine
63
adipose tissue
47
artery
44
bone element
44
extraembryonic component
39
stomach
38
lymph node
38
mammary gland
38
prostate gland
34
penis
25
ureter
24
gonad
23
placenta
23
small intestine
20
adrenal gland
19
spinal cord
18
esophagus
18
uterus
16
spleen
15
nerve
15
thymus
15
vein
14
testis
13
pituitary gland
9
lymphatic vessel
9
ovary
9
skeleton
8
lymphoid tissue
8
thyroid gland
7
bone marrow
7
breast
7
mouth
6
bronchus
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
pericardium
Project
4249
AMP
333
ENCODE
281
KPMP
59
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
3735
hg19
489
GRCh38
4
hg18
files.file_type!
bed bed9
txt
month_released!
February, 2024
September, 2022
BIOSAMPLE
TYPE
4249 results
search-icon
table-tab-icon
Clear Filters
histone modifications
candidate regulatory elements
binding sites
accessible chromatin
gene expression
target gene predictions
eQTL
variant allelic effects
Fine-mapped variants
chromatin state
differential activity
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
cell line
EndoC_BH1
1
1
8
8
1
1
1
breast cancer cell
11
9
H1-hESC
1
2
1
8
1
lymphoblastoid cell line
3
2
1
6
neuroblastoma cell
8
4
+ See 739 more…
tissue
islet of Langerhans
1
2
5
11
1
12
1
2
3
2
2
kidney
2
15
1
10
7
1
1
heart
1
18
1
5
3
1
2
retina
1
3
1
23
1
1
1
stomach
1
21
3
1
2
1
+ See 244 more…
primary cell
monocyte
86
1
17
15
1
4
2
1
1
CD8-positive, alpha-beta T cell
30
7
2
2
3
1
CD14-positive monocyte
4
15
hepatocyte
4
1
1
2
8
1
1
endothelial cell
1
3
2
3
5
2
+ See 272 more…
in vitro differentiated cells
neural progenitor cell
15
1
10
7
1
adipocyte
1
2
1
3
1
4
4
hematopoietic multipotent progenitor cell
1
9
1
1
1
cardiomyocytes
11
embryonic stem cell
1
1
6
1
+ See 114 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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